GPCR-Lipid Interactions

Visualize lipid-protein interactions

Visualization Apps


The applications below contain collected GPCR-lipid protein interactions data. The current dataset contains information on 28 different GPCRs, and we hope to add more soon. All of the data presented here and contained in the application below is part of the following work: Link to the article

We will add support for exporting and downloading the data very soon!

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Point Distribution

Interactions visualized as a point plot where each point represents the interaction of one residue with a particular lipid.

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Aligned Sequences

GPCR-lipid interactions mapped into a heatmap of aligned sequences.

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Heatmap Viewer

Interactive 3D visualization of lipid densities and projected contact heatmaps onto the surface of proteins.

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Network Graph

Lipids/proteins are represented as collapsible nodes and their interactions with each other as edges.

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Thickness & Curvature

The changes that proteins induce in their surrounding lipid environment are displayed using thickness and curvature mesh files.

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Density Distribution

Real-time interactive 2D densities.

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Metric Comparison

Per residue comparison of calculated contact metrics. Employs an interactive radar plot to display values.

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Error Bars and p-values

Application visualizing different statistical parameters as well as allowing the user to select and compare values between different proteins.

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